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Acta Phytopathologica Sinica 2006 Vol.36
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The status of maize diseases and the possible effect of variety resistance on disease occurrence in the future
WANG Xiao-ming, JIN Qi-ming, SHI Jie, WANG Zuo-ying, LI Xiao
Acta Phytopathologica Sinica 2006, 36 (
1
): 1-11.
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197
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With the changes of the global climate, cultivation methods and release of new varieties, the maize diseases have changed in recent years in China. In spring maize zone the head smut has been continually severe and the northern corn leaf blight has become severe again. In summer maize zone the southern corn leaf blight has been a problem in some areas and maize dwarf mosaic is slight. Some diseases which used to be unimportant have become main diseases now, e.g. southern corn rust in the south areas of summer maize zone, common corn smut and soil-borne diseases in all of growing areas, bacterial leaf diseases in some fields. On the basis of the result of analysis on resistance of varieties released, which were verified by national and provincial crop committees, it can be predicted that in the north spring maize zone the northern corn leaf blight will he severe because of the low level of resistance in varieties and new virulent race in the pathogen. As release of resistant varieties and use of seed-dressing technique the head smut will be controlled effectively, but in some areas it will be severe continuously. The occurrence of gray leaf spot and curvularia leaf spot will be affected by the weather. In north summer maize zone the southern corn leaf blight will be not severe. Stalk rot and seedling blight will be main problems because most of the varieties possess low level of resistance and new cultivation methods have been developed. Southern corn rust will be severe and heavily.
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Multiple RT-PCR detection of viruses in pear
NIU Jian-xin, MA Bing-gang, HE Mei, LI Hai-sheng, ZHAO Ying, LI Xi-ping, ZHOU Duo-jin
Acta Phytopathologica Sinica 2006, 36 (
1
): 12-21.
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117
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A 181 bp fragment of NADH dehydrogenase subunit 5 (
nad5
) gene cloned from mitochondrial DNA of apple was used as internal control in detection of three pear viruses by multiplex RT-PCR assays. The recovered fragments were cloned, sequenced and identified. Sequencing results indicate that the ACLSV on Kuala fragrant pear reveals 116 base difference between 6860 and 7536 bp and sequence identity is 83.75% compared with sequence D14996 (isolates of Japan ACLSV); the ASPV on Kuala fragrant pear shows 72 base difference from 8869 to 9238 bp and sequence identity is 79.5% compared with sequence D21828 (isolates of German
pear vein yellows virus
); and the ASGV on Kuala fragrant pear has only 21 base difference from nucleotide 6039 to 6311 bp and sequence identities attain 92.3% highly compared with AB004063 in GenBank (isolates of Japan ASGV).
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Characteristics of sweet potato stem nematode in China
ZHANG Shao-sheng, ZHANG Su-ling, WANG Hong-yi, CHEN Yu-fen
Acta Phytopathologica Sinica 2006, 36 (
1
): 22-27.
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252
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Sweet potato stem nematodes were collected from the sweet potato fields in Hebei, Shandong and Anhui provinces, China and identified as
Ditylenchus destructor
Thorne, 1945. Female:labial framework well sclerotized,lip region slightly set off from the body, with six lips and four annules,lateral fields are with six incisures and areolation. Median bulb is fusiform and weak thickenings, oesophageal glands usually overlapping the intestine on the dorsal side for half to one body width, some overlapped on the lateral and the ventral side. Tail conoid, slight ventral curvatured and with a narrow rounded terminus. Oocytes arranged in a double row in the anterior part of the ovary;the vulva lips slightly elevated, vulva slit oriented at a straight angle from the body axis, vulva width occupied four annules, the post uterine sac extended about three quarters of the distance to the anus. Male:anterior region similar to female. Cloaca slightly elevated,bursa extended from opposite the anterior end of the spicules to about the three quarters the tail length;spicules curved ventrally arcuate, expanded anteriorly with finger processes; gubernaculum short.
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Race identification and SCAR markers development for the pathogen of banana Panama disease
Fusarium oxysporum
f. sp.
Cubense
LIU Jing-mei, CHEN Xia, WANG Bi-sheng, HE Zi-fu, PENG Ai-tian, CAI Man-shan
Acta Phytopathologica Sinica 2006, 36 (
1
): 28-34.
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The pathogenicity of 18 strains of
Fusarium oxysporum
f. sp.
cubense
(FOC) from banana-growing regions in Guangdong province were identified on the differential hosts. The strain KP021,KP022,GZ981 and JL021 belonged to race 1, and the other strains belonged to race 4. A total of 200 oligonucleotides were used as primers to perform random amplified polymorphic DNA (RAPD) analysis, eight of them could amplify racespecific DAN fragments. Based on the cloning and sequencing of these RAPD marker fragments,the sequence characterized amplified region (SCAR) primers were designed respectively. The PCR amplification of the 18 FOC isolates and 9 new field isolates with SCAR primers showed that 4 SCAR markers could be specifically used to separate race I and/or race 4. These results provide a possible approach to identify the physiological races of FOC by molecular techniques and to monitor the epidemic trend of the 2 races in the fields.
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Transiently expressed siRNAs targeting coat protein gene of
Tobacco mosaic virus
interferes with the virus infection
ZHAO Ming-min, AN De-tong, HUANG Guang-hua, HE Zu-hua, CHEN Jiang-ye
Acta Phytopathologica Sinica 2006, 36 (
1
): 35-40.
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122
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Double-strand RNA (dsRNA) induced sequence-specific post-transcriptional gene silencing was known as RNA interference (RNAi). siRNA, an important intermediate of the RNA-interference pathway, are very effective in antiviral therapy in many organisms including mammals and plants. Oligonucleotides expressed siRNA were designed and synthesized according to the coat protein (CP) gene of
Tobacco mosaic virus
(TMV) and subcloned to the binary vector pBI121. The interference effects of siRNA targeting CP gene on TMV infection were studied by
Agrobacterium
-mediated transient expression system. Our results showed that transiently expressed siRNA could specifically interfere with TMV infection. Fourteen days after inoculation with TMV, the upper leaves of
Nicotiana tobacum
infiltrated with
Agrobacterium tumefaciens
cultures containing pBI121/siRNA were free of mosaic symptom. Northern blot assays also showed there were no or much less TMV RNA accumulation in these leaves. As for local lesion host,
Nicotiana glutinosa
, transiently expressed siRNA could reduce the lesion number resulting from TMV infection. In addition, transiently expressed siRNA targeting CP gene of TMV was unable to inhibit
Cucumber mosaic virus
(CMV), which indicated that the interference effect of siRNA was strictly dependent on the specific nucleotide sequence. Therefore, we supposed that the combination of siRNA technique and
Agrobacterium
-mediated transient expression system could be used as an antiviral treatment or rapid diagnostic tool in plants.
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PVY
N
CP
gene silencing and transgenic resistance to PVY
N
are temperature dependent in tobacco
LI Fang, GUO Xing-qi, HOU Wen-cui, WU Xiao-liang
Acta Phytopathologica Sinica 2006, 36 (
1
): 41-48.
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120
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The influence of temperature on RNA silencing and the level of resistance in transgenic tobacco plants was studied by using Northern blotting and ELISA to detect the virus in T
3
plants that contain untranslatable
PVY
N
CP
gene. The results shown that low emperature could change the RNA silencing that had occurred in transgenic plants and the resistance status. RNA silencing obtained by transgene was inhibited in plants grown at 15℃. The plants lost the characteristic of high resistance and displayed the symptom of susceptibility. RNA silencing obtained by transgene was not inhibited, however, in the transgenic plants that grown at 25℃ or above,i. e. 30℃ and 35℃. The transgenic plants maintained high resistance against PVY
N
virus.
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Effect of
Puccinia striiformis
West infection on cyanide-resistant respiration and metabolism of reactive oxygen in wheat
Wu Qiang, FENG Han-qing, LI Hong-yu, WAN Dong-shi, JIA Qiu-zhen, LI Min-quan, LIANG Hou-guo
Acta Phytopathologica Sinica 2006, 36 (
1
): 49-56.
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106
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Induction and operation of the alternative pathway, the changes of active oxygen species levels and antioxidant enzymes activity during stripe rust infection were studied and discussed in this paper. Experiments showed that the content of H
2
O
2
in the disease-susceptible cultivars was higher than that in the disease-resistant ones after 8 d of inoculation. But the change of O
2
-
·content was regular. The activities of SOD, CAT and POD increased at the early stage of infection. But after 4 d of inoculation,they presented a trend of decreasing in susceptible wheats and were higher in the disease-susceptible ones than those in the disease-resistant ones. During stripe rust infection, the changes in the capacities and operation of alternative pathway in wheat seedling leaves was similar as the changes of content of H
2
O
2
. And no significant variance was observed in the
aoxl
mRNA level in wheat seedling leaves by Northem blotting, except an increase in the fourth day after inoculation. All those results indicate that active oxygen species induce the alternative pathway in some extend,and alternative pathway may participate in the lower active oxygen species and the protection mechanism against pathogen attacking.
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Detection of
Apple stem grooving virus
by real-time fluorescent RT-PCR one step assay
GUO Li-xin, XIANG Ben-chun, CHEN Hong-yun, DUAN Wei-jun, CHEN Hong-jun, ZHU Shui-fang
Acta Phytopathologica Sinica 2006, 36 (
1
): 57-61.
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120
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A pair of primers and a TaqMan-MGB probe based on the conserved nucleotide sequence of coat protein (CP) gene of several
Apple stem grooving virus
(ASGV) isolates were designed and synthesized. A novel real-time fluorescent RT-PCR was established to detect ASGV. The covalent attachment of the minor groove binder moiety at the 3'end of the probe raised the melting temperature to a range suitable for real-time analysis, shortened the probe, and solved the problem of detecting virus with high genome variability among isolates, where an identical sequence can not be found without multiple mismatches. The method was ten times more sensitive than normal RT-PCR and suitable for the detection of those viruses with low concentration in fruit trees. The method was rapid, sensitive and completed within a single tube, without post-PCR handling of the amplification products.
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Cloning and sequence analysis for the
CP
gene of
Apple stem grooving virus
from pears
ZHENG Yin-ying, HONG Hi, WANG Guo-ping, HU Hong-ju
Acta Phytopathologica Sinica 2006, 36 (
1
): 62-67.
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104
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Four isolates of
Apple stem grooving virus
, P-6-1-17, P4-1-69, P-L2 and P-D-21 from pears in China, which displayed different reactions in biological and serological tests, were studied for their molecular characteristics. RT-PCR products of 3'end of the four isolates were cloned and sequenced. The sizes of cloned fragments are 1089 nt from P-6-1-17 and P-L2, and 1069 nt from P-4-1-69 and P-D-21, respectively, which include the 714 nt
CP
-coding region. The similarities of nucleotide and deduced amino acid sequences of the
CP
genes among these isolates are 89.8% to 96.4% and 94.9% to 97.9%, respectively. The sequence data obtained in the study were compared with previously reported sequences of ASGV isolates and sequence variant species from different sources. Results suggested that isolates P-6-1-17, P-4-1-69,P-L2 and P-D-21 should be divided into two different subgroups. P-L2 showed different reactions in biological test and its
CP
gene also has a relatively high variability.
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Identification of the molecular markers linked to the resistance gene to
Zucchini yellow mosaic virus
Chinese strain in watermelon
MA Shao-qin, XU Yong, ZHANG Hai-ying, GONG Guo-yi, SHEN Huo-lin
Acta Phytopathologica Sinica 2006, 36 (
1
): 68-73.
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122
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Zucchini yellow mosaic virus
Chinese strain (ZYMV-CH) is a major virus that causes severe losses in watermelon. The 109 lines of F
3
derived from the single cross of the resistant wild germplasm P. I. 595203 and the susceptible inbred 98R were identified for their resistance to ZYMV-CH. The genotypes of 109 F
2
individuals were assumed by the segregation of F
3
population resistance. Using bulked segregant analysis (BSA), 640 RAPD primers were screened in resistant and susceptible parents, F
1
and bulks. We found that a 644 bp fragment specifically amplified with RAPD primer AK13 which were present in P. I. 595203 and the resistant gene bulk but absent in 98R and the susceptible gene bulk. It was confirmed that the marker AK13
-644
was linked to the gene resistant to ZYMV-CH in P. 1.595203 by screening 109 F
2
individuals and the linkage distance was 8 cM. The RAPD marker AK13
-644
was confirmed in the introgressed resistant inbreds, and was transformed into SCAR marker SCAK13 -644 successfully. The result showed that this marker could be useful for marker-assisted selection in watermelon breeding for virus resistance.
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Pathogenicity of
Botrytis cinerea
on postharvest grape berries
XU Ling, ZHANG Sheng-yu, WANG Yi-wen, LI Xi-hong
Acta Phytopathologica Sinica 2006, 36 (
1
): 74-79.
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453
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The gray mould
Botrytis cinerea
is one of the most important plant pathogenic fungi that cause postharvest disease in grape berries. The pathogen infected latently in flowering period and persistently resided in the fruits during the marketing. The latent infection of grape berries by this pathogen was more dominant than by other postharvest disease pathogens,
Alternaria, Fusarium, Cladosporium, Penicillium, Aspergillus
and
Trichothecium
. Conidia and hyphae of
B. cinerea
survived under low temperature storage (at 4℃) condition and caused serious damage to stored and marketed grape berries. Diseased berries showed the typical symptoms as fruit rot and abscission. This symptomatic feature was characterized in part by the low-temperature tolerance of pectinolytic enzymes secreted by
B. cinerea
. In this study, we also compared the activity of cell wall degrading enzymes between
B. cinerea
and other fungi,and found that this fungi utilized pectin much better than others,but not decompose cellulose effectively. The polygalacturonase of this pathogen showed higher activity at 40℃ than those of other pathogens, coincident with the progress of disease symptom in berries at this temperature. On the other hand,there was no significant difference in the enzymatic activity at 25℃ between
B. cinerea
and other pathogens. Thus, the present work provided some enzymatic evidences for elucidating infection strategy of
B. cinerea
.
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Biological Control of Bacterial Wilt of Tomato by
Bacillus
spp. under Greenhouse Environment
Algam A. SOAD, XIE Guan-lin, LI Bin, HAO Xiao-juan, Jef COOSEMANS, LIU Bo
Acta Phytopathologica Sinica 2006, 36 (
1
): 80-85.
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142
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Eighty-one isolates of
Bacillus
were evaluated for their ability to inhibit the growth of
Ralstonia solanacearum in vitro
. Four isolates (B2, B5, B7 and B8) showed inhibitory effect on bacterial growth, were identified as
Brevibacillus brevis
B2,
Bacillus subtilis
B5,
Ba. subtilis
B7, and
Ba. subtilis
B8, respectively, by bacteriological assays, Biolog test and 16S rDNA sequence analysis. Four isolates promoted plant growth and reduced the infection of tomato wilt in sterile and nonsterile soil under greenhouse conditions to a varying degree as compared with non-treated control. Strain B2 showed significantly reduction of the disease infection by 80.0% and 87.4% in sterile and nonsterile soil, respectively.
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Comparison of six staining techniques for studying life cycle of
Pseudoperonospora cubensis
ZHU Shu-sheng, LIU Xi-li, LIU Peng-fei, FAN Jie-ru, YUAN Shan-kui
Acta Phytopathologica Sinica 2006, 36 (
1
): 86-90.
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123
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Fluorescence staining methods of calcofluor, aniline blue, and uranine and the techniques of alcoholic lactophenol trypan blue, coomassie brilliant blue and aniline blue for different phases in life cycle of
Pseudoperonospora cubensis
were comparaed. The results showed that three kinds of fluorescence techniques can be used to stain sporangia, cystospore, germ tube, appressorium, and sporangiophore of
P. cubensis
in situ
on the leaf surface. But staining with calcofluor was easier to handle, faster, and more reliable than the other two. Trypan blue was appropriate for staining of the intercellular hypha and haustorium.
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Inhibitory effects of several volatile organic compounds of
Lycopersicon esculentum
on
Fusarium oxysporum
f. sp.
Lycoporsici
ZHANG Peng-ying, HE Pei-qing, CHEN Kao-shan, XIE Han-bing
Acta Phytopathologica Sinica 2006, 36 (
1
): 91-93.
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89
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Induced expression of S receptor protein kinase in rice with
Magnaporthe grisea
FU Wen-qun, JIA Xian-lu, ZHOU Guo-hui, DUAN Jun
Acta Phytopathologica Sinica 2006, 36 (
1
): 94-96.
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83
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Rapid diagnostic of
Phytophthora
Root rot of
Gerbera jamesonii
by PCR
GUO Cheng-bao, ZHANG Zheng-guang, WANG Yuan-chao, ZHENG Xiao-bo
Acta Phytopathologica Sinica 2006, 36 (
2
): 97-101.
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136
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Root rot of
Gerbera jamesonii
caused by
Phytophthora cryptogea
is a serious disease in China, especially in wet condition. Since many pathogens were reported could infect the root of
G. jamesonii
and the isolation and identification of
Phytophthora
is really difficult, a rapid and accurate method for specific detection of
P. cryptogea
is necessary for determination of root rot in diseased
G. jamesonii
tissue. Based on the alignment of ITS sequences from Oomycetes, two primers were synthesized and a PCR based protocol was designed to detect and diagnostic of the
G. jamesonii
root rot caused by
P. cryptogea
specifically. Among 46 isolates representing 23 species of Oomycetes and fungi, a PCR product about 620 bp could only be amplified from
P. cryptogea
. The detection sensitivity is about 10 pg. The PC primer based PCR assay will provide a accurate and sensitivity tool for detection of
P. cryptogea
in
G. jamesonii
root rot.
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Comparison of immunoStrip and real-time fluorescent PCR(TaqMan)for detection of
Acidovorax avenae
subsp,
citrulli
, the causal agent of bacterial fruit blotch of watermelon
FENG Jian-jun, XU Yong, LI Jian-qiang, Norm W. SCHAAD
Acta Phytopathologica Sinica 2006, 36 (
2
): 102-108.
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131
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To assess the threshold and efficiency of immunoStrip and real-time fluorescent PCR for detection of
Acidovorax avenae
subsp,
citrulli
in cell suspension from pure culture and in extracts from naturally infested or infected tissues, a comparative study was conducted. The results showed that immunoStrip testing, with threshold 10
6
cfu/mL, was simple, fast and easy to handle, which adapted for fast detection and diagnosis in field. Compared with classical-PCR (threshold 10
5
cfu/mL), real-time fluorescent PCR (TaqMan) didn't require agarose gel electrophoresis, ethidium bromide staining, and Southern blotting. Moreover, it had a much higher sensitivity, accounting for 10
3~4
cfu/mL, but required expensive instrument, and was adapted to lab testing and basal research.
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Development of a PCR Diagnostic for the Root-knot Nematode
Meloidogyne enterolobii
LONG Hai, LIU Hao, XU Jian-hua
Acta Phytopathologica Sinica 2006, 36 (
2
): 109-115.
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The root-knot nematode
Meloidogyne enterolobii
Yang and Eisenback 1983 is a potentially important crop pathogen in China. To provide means to assist in preventing the spread of
M. enterolobii
, a single-step PCR diagnostic was developed for the nematode. The diagnostic primers were designed based on an alignment of ribosomal intergenic spacer 2 (IGS2) sequences from
M. enterolobii, M. incognita, M. javanica, M. arenaria
and
M. hapla
. The reliability of the diagnostic test has been validated by screening different geographic populations of six closely related
Meloidogyne
species and natural mixed soil nematode populations. The test is fast and sensitive, it can be used for direct diagnosis of a single nematode and for detection of
M. enterolobii
in mixed soil nematode populations.
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Mapping of avirulence gene
AVR-Pik
m
in Magnaporthe grisea
ZHANG Lian-hong, YAN Ji-ye, ZHAO Wen-sheng, ZHANG Guo-zhen, GUO Li-yun, PENG You-liang
Acta Phytopathologica Sinica 2006, 36 (
2
): 116-122.
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Avirulence genes in pathogens are functional genes that determine if or not the race-specific resistance is expressed in host cultivars. Function lose of the genes results in generation of virulent races in pathogen population. In previous studies, two SCAR markers, SCO12
946
and SCE12
1406
that are linked with the avirulence gene
AVR-Pik
m
in
M. grisea
were isolated. In this investigation, the two SCAR markers were mapped on the chromosome I by sequencing the end of the TAC clones and their comparison with the whole genome draft sequence of 70-15. On the basis of this result, four more DNA markers linked with
AVR-Pik
m
, SSR47T34, SSR50CA24, SSR52TAGG18 and SSR56A28, were identified utilizing the whole genome draft sequence of
M. grisea
70-15 and SSR. Further analysis indicated that the four SSR markers lie on the side opposite to the two SCAR markers; the genetic distance between the four SSR markers and
AVR-Pik
m
is 4.90,7.01, 19.12,21.94 cM, respectively. This mapping will facilitate isolation of
AVR-Pik
m
by chromosome walking.
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Detection of
Erwinia amylovora
by real-time fluorescent PCR
QIAN Guo-liang, HU Bai-shi, LU Ling, LIU Feng-quan, XU Zhi-gang
Acta Phytopathologica Sinica 2006, 36 (
2
): 123-128.
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147
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One pair of specific primes (REA/FEA) is designed based on the conserved sequence of internal transcribe spacer (ITS) between 16S rDNA and 23S rDNA of
E. amylovora
,SYBR Green I real-time fluorescent PCR method, which has no post-PCR manipulations and reduces false positive result and contamination risks, is established for detection of this bacteritum. In all tested bacterial strains, only
E. amylovora
can be detected. Detection limitation of pure culture and artificially inoculated samples were 4 and 24 bacterial cells, sensitivity was 10 times higher than PCR gel electrophoresis detection.
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Construction of subtraction libraries in association with appressorium formation expressed genes of
Magnaporthe grisea
LIU Tong-bao, LU Jian-ping, LIN Fu-cheng
Acta Phytopathologica Sinica 2006, 36 (
2
): 129-134.
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102
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A subtractive libraries in association with appressorium formation expressed genes of
M. grisea
24 hours after the conidia inoculated was constructed by suppression subtractive hybridization (SSH). The experiment was carded out with appressorium induced on projection membrane. The ratio of appressorium formation on projection membrane was 96.5% at 1.0×10
6
conidia.mL
-1
. Total RNA was extracted from appressorium and mixture of mycelium and conidia and reverse-transcripted into cDNA. After cut and ligation, suppression subtractive hybridization was performed with appressorium cDNA as tester and the mycelium/conidium cDNA as driver to construct subtractive libraries. Reliability of the libraries was evaluated by approach of comparing RT-PCR products with templates from tester and driver cDNAs. The results indicated that 142 target segments were isolated from the library; seventy one of them were verified to be differential expressed genes by RT-PCR, which suggested that the libraries were reliable and efficient. This study founded the basis of further investigation of genes' expression and function during the course of appressorium formation by constructing subtractive libraries in associated with appressorium formation differential expression genes.
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Purification and characterization of an extracellular protease from
Rhizoctonia cerealis
ZHAO Lei, ZHANG Tian-yu
Acta Phytopathologica Sinica 2006, 36 (
2
): 135-141.
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Rhizoctonia cerealis
could secrete several extracellular proteases when grown in liquid medium with wheat cell walls as the sole carbon and nitrogen source. A kind of protease was purified after ammonium sulfate precipitation, SP-Sepharose Fast Flow chromatography, Phenyl (high-sub) -Sepharose Fast Flow chromatography and Sephadex G-75 chromatography. It appeared as a single band corresponding to molecular weight (MW) of approximately 40 kD on SDS-PAGE with silver staining. It showed high activities against the trypsin substrate Benz-Phe-Val-Arg-NA, and also the substrates D-Val-Leu-Arg-NA, Benz-Pro-Phe-Arg-NA and D-Val-Phe-Lys-NA. It was strongly inhibited by aprotinin, leupeptin, soybean trypsin inhibitor and partly inhibited by PMSF, indicating that it is quite probably a trypsin-like protease.
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Detection of
Tilletia indica
and
Tilletia walkeri
by 5'-nuclease assays using TaqMan MGB probe
ZHANG Gui-ming, CHENG Ying-hui, WANG Ying, YANG Wei-dong, YI Jian-ping
Acta Phytopathologica Sinica 2006, 36 (
2
): 142-151.
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128
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The 9 species including 9 strains of
T. indica
,5 strains of
T. walkeri
and their similar or related species,
Tilletia horrida, Tilletia barclayana, Tilletia setariae, TiUetia sumatii, Tilletia fusca, Tilletia tritici
and
Tilletia controversa
were studied. The primers and TaqMan MGB probes were designed for detection of
T. indica
and
T. walked
based on nucleotide differences within the target fragment sequences. The fluorescent monoplex PCR and doubleplex PCR were respectively developed. By the fluorescent doubleplex PCR,
T. indica
or
T. walkeri
was specifically detected simultaneously through one PCR reaction with 5 μL reaction volume per tube. These two methods, with the cost being obviously lower, are rather specific, reliable, rapid and suitable for application in routine quarantine.
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Rapid detection of Tomato bacterial canker (
Clavibacter michiganensis
subsp.
michiganensis
) with real-time fluorescent PCR
XIA Ming-xing, ZHAO Wen-jun, MA Qing, ZHU Shui-fang
Acta Phytopathologica Sinica 2006, 36 (
2
): 152-157.
Abstract
(
118
)
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Clavibacter michiganensis
subsp,
michiganensis
is the most relevant tomato bacterial pathogen. The specific primers sets and TaqMan probe were designed based on the region of ITS to detect
Cmm
with real-time fluorescent PCR (RTF PCR). The RTF PCR was approximately 100 times more sensitive and more specific than normal PCR. Strong fluorescent signal could be collected during the reaction that the DNA extracted directly from the latent infected seed and seedling were used as template. This method provides a specific, sensitive, rapid detection of
Cmm
for the seed and the seedling industry.
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in oxalic acid induced POD activity in
Malus hupehensis
(
Pamp
) Rehd. 1eaves
LIU Gao-feng, YANG Hong-qiang
Acta Phytopathologica Sinica 2006, 36 (
2
): 158-162.
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(
104
)
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The role of Calcium signaling in POD activity induced by oxalic acid in
Malus hupehensis
(
Pamp
) Rehd. leaves was studied by treating the leaves with Li
+
, EGTA, verapamil (Ver) and chlorpromazine (CPZ). The results showed that these inhibitors could inhibit POD activity induced by oxalate when they were applied at the same time with oxalate or before oxalate treatment. The effect of the inhibitors and oxalate suggested that Ca
2+
, Ca
2+
-channel, Calmodulin (CaM) and inositol -1,4,5-tfisphosphate (IP
3
) might be involved in the signal transduction by which oxalate induced POD activity. In addition, these inhibitors could inhibit POD activity induced by oxalate when they were applied after oxalate treatment. The effect of EGTA and Ver applied after 8 h was greater than that of them applied after 4 h of oxalate treatment on POD activity induced by oxalate. The effect of CPZ and Li
+
applied after 4 h was similar with that of them applied after 8 h of oxalate treatment on POD activity induced by oxalate.
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Harpin
Xoo
induced hypersensitive cell death:H
2
O
2
accumulation and related gene expression
LIU Ai-xin, LI Duo-chuan, DONG Hart-song, WANG Jin-sheng
Acta Phytopathologica Sinica 2006, 36 (
2
): 163-168.
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(
125
)
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To characterize molecular and biochemical mechanisms of the hypersensitive reaction (HR) in plants, tobacco plants (
Nicotiana tobacum
cv.
Xanthi
n. c.) were treated with the proteinaceous HR elicitor harpin
Xoo
from pathogenic bacteria
Xanthomonas oryzae
pv.
oryzae
. Tobacco leaves infiltrated with 40μg/mL harpin
Xoo
developed lesions reminiscent of the hypersensitive response at the 20th hour after being treated. Using Evans blue and Trypan blue staining, we investigated the kinetics of dead cells in tobacco leaves induced by harpin
Xoo
. The results indicated that micro-HR began to occur at the 4th hour after treatment. Since H
2
O
2
was suggested to be a signal in cell death,we analyzed the generation of H
2
O
2
using DAB staining. H
2
O
2
accumulated rapidly and obviously following harpin
Xoo
treatment. The results of quantitative RT-PCR showed that the time course of harpin
Xoo
induced H
2
O
2
accumulation is similar to that of the expression of the gene
rboh
. Expression of
aoxl
is a relatively late event, but the expression of
sodA
is decreased after induction by harpin
Xoo
.
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Observation of egg parasitism of
Meloidogyne incognita
by
Paecilomyces lilacinus
strain FZ-0289
in vitro
LIU Guo-kun, XIAO Shun, ZHANG Wen, ZHANG Shao-sheng
Acta Phytopathologica Sinica 2006, 36 (
2
): 169-170.
Abstract
(
129
)
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75
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Biocontrol of
Tobacco etch virus
by using
Sugarcane mosaic virus
WANG Xiu-min, CHENG Ju-long, WU Yun-feng, WEI Ning-sheng
Acta Phytopathologica Sinica 2006, 36 (
2
): 171-173.
Abstract
(
94
)
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56
)
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Production of monoclonal antibodies to mycelium protein of
Setosphaeria turcica
XING Ji-hong, DONG Jin-gao
Acta Phytopathologica Sinica 2006, 36 (
2
): 174-176.
Abstract
(
111
)
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58
)
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Resistance of rice near-isogenic lines to bacterial blight strains in South China
ZENG Lie-xian, YANG Jian-yuan, CHEN Shen, WU Sheng-yuan, CHEN Zhen, ZHU Xiao-yuan
Acta Phytopathologica Sinica 2006, 36 (
2
): 177-180.
Abstract
(
95
)
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66
)
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Changes in activities of four defense enzymes in different resistant maize cultivars infected with
Sugarcane mosaic virus
(SCMV)
SUN Hong-wei, LU Xing-bo, YANG Chong-liang, SHANG You-fen, ZHAO Jiu-hua, WANG Sheng-ji
Acta Phytopathologica Sinica 2006, 36 (
2
): 181-184.
Abstract
(
106
)
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117
)
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Identification of RAPD and SCAR markers linked to root-knot nematode resistant genes in tomato
LI Hong-shuang, LI Jing-fu, XU Xiang-yang
Acta Phytopathologica Sinica 2006, 36 (
2
): 185-188.
Abstract
(
92
)
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80
)
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TMV and CMV widely infect cultivated
Rehmannia glutinosa
Libosch.
WANG Min, LI Ming-fu, HUANG Lu-qi, CHEN Yah-fang, WU Zhi-gang, LI Gui-fen, WEI Mei-sheng, FANG Rong-xiang
Acta Phytopathologica Sinica 2006, 36 (
2
): 189-192.
Abstract
(
101
)
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91
)
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Maize Stalk Rot and Ear Rot in China
XU Shu-fa, CHEN Jie, GAO Zeng-gui, ZOU Qing-dao, JI Ming-shan, LIU Hai-nan
Acta Phytopathologica Sinica 2006, 36 (
3
): 193-203.
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(
137
)
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This review provides a broad overview of etiology, mechanism of pathogenesis and host resistance and IPM strategies involved in maize stalk rot and ear rot diseases in China. Some different viewpoints in the past are discussed in etiology of stalk rot occurring in China. The relation of both diseases is particularly evaluated based on
Fusarium
polymorphism analysis at the level of soluble protein, serology, isozymes and DNA, which are also further analyzed in accordance with the knowledge obtained by tracing pathogen infection process within the host root and stem tissue and trapping airborne spores nearby corn plants in the field. The recent researches of both diseases are summarized in physiological and biochemical mechanism of host resistance and resistant genetics, as well as IPM measures centered mainly in the application of biological control agents are summarized.
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Optimization and application of a multiplex RT-PCR system for simultaneous detection of three lily viruses using 18S rRNA as internal control
WANG Chong, CHEN Ji-shuang, HONG Jian, DU Zhi-you, ZHANG Hua-rong, CHEN Shao-ning
Acta Phytopathologica Sinica 2006, 36 (
3
): 204-211.
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(
132
)
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Reaction components and reaction cycling parameters were optimized for a multiplex RT-PCR protocol to simultaneous detection for three lily viruses with 18S ribosomal RNA used as an internal control. The first strand eDNA was synthesized using reverse transcriptase and primer mixture of three virus-specific reverse primers (0.5 μmol/L each) and 18S rRNA reverse primer (0.5 μmol/L). A series of conditional assays resuited in modification of the standard reaction components. Utilization of a DNA polymerase concentration of 0.100 U/μL, Mg
2+
of 4.0 mmol/L, and four primer pairs of 0.2 μmol/L each was set for simultaneously amplificating the cDNAs of
Lily mottle virus
(LMoV),
Cucumber mosaic virus
(CMV),
Lily symptomless virus
(LSV) and 18S rRNA with more than 25 cycles. The above multiplex system was able to detect different virus combinations. The feasibility of multiplex RT-PCR was investigated by analyzing 10 leaf tissue samples. Compared to
32
p labeling nucleic acid hybridization, this optimized multiplex RT-PCR system was of higher sensitivity and specificity for detection of the above viruses infecting lily plants.
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Identification of the Pathogenic
Fusarium oxysporum
f. sp.
spinaciae
Using RAPD-STS and Real-time PCR
JIANG Ting-bo
Acta Phytopathologica Sinica 2006, 36 (
3
): 212-218.
Abstract
(
123
)
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Fusarium wilt of spinach incited by the pathogenic fungus
F. o
. f. sp.
spinaciae
is a very important disease of spinach worldwide. Classical diagnosis of this disease normally requires many days and often gives erroneous results. Differential detection assays employing randomly amplified polymorphic DNA-sequence tagged sites (RAPD-STS) were developed for
F. o
. f. sp.
spinaciae
. Unique fragments (GenBank accession number AY337463) from RAPD profiles that differentiated the pathogens and other isolates were cloned and sequenced. Then six pairs of primers were designed and used for two types of polymerase chain reaction (PCR) techniques (a classical PCR and a real-time PCR) to compare the sensitivity. Results demonstrated that only one of the primer sets amplified a clear single fragment specifically for isolates of
F. o
. f. sp.
spinaciae
, and worked well in both of the PCR techniques. Classical PCR was able to detect at least 100 pg of pathogen DNA, while the real-time PCR method using SYBR Green Ⅰ on the Smart Cycler was capable of detecting less than 1 pg of pathogen DNA, and was able to rapidly diagnose the disease and quantitatively assay pathogen DNA. This method was optimized for using DNA extracted from the microconidia of the fungus, and may be useful for field disease diagnosis and prognosis.
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Rapid molecular identification and detection of
Colletotrichum musae
with species-specific primers based on the internal transcribed spacer(ITS) region
YANG La-ying, HUANG Hua-ping, TANG Fu-run, HU Mei-jiao, ZHANG Shi-qing, HUANG Jun-sheng
Acta Phytopathologica Sinica 2006, 36 (
3
): 219-225.
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(
130
)
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A polymerase chain reaction (PCR) protocol was developed to specifically detect
C. musae
, the causal agent of banana anthracnose. Approximately 510 bp fragment of
C. musae
and the other outgroup fungal genome DNA were amplified by using the universal primers 18SF and 28SR of internal transcribed spacer (ITS) region of eukaryote 18S-28S ribosomal DNA. The species-specific PCR primes ColM1 and ColM2 for
C. musae
were designed after multiple sequence alignment of
C. musae
and the other species of
Colletotrichum
genus. By which a 382 bp single fragment with DNA from the isolates of
C. musae
was amplified, no product was amplified with DNA from other fungi and DNA of banana tissue. 0.1 pg
C. musae
genomic DNA was detected by species-specific primers. The PCR protocol provides a rapid and reliable tool for routine detection and identification of
C. musae
. In addition, it is important that we can inspect whether
C. musae
infect the banana tissues or not and also significative to take control measures timely.
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Detection and molecular characterization of
Coleus blumei viroid
in China
SU Qian-fu, GUO Rui, CHENG Zhuo-min, SANO TERUO, LI Shi-fang
Acta Phytopathologica Sinica 2006, 36 (
3
): 226-231.
Abstract
(
118
)
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58
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The low molecular weight RNAs from 11 coleus plants were characterized by Return-PAGE, RT-PCR and Dot-blot hybridization. The results showed that all the 11 coleus plants were infected by
Coleus blumei viroid
. The amplified products of RT-PCR were cloned into vector pGEM-3Zf (+) and sequenced. 5 sequences variants were registered in GenBank DQ178395,DQ178396,DQ178397,DQ178398 and DQ178399, and compared with reported sequences of CBVd-1 in GenBank showing 85.23%-99.20% identity. No Coleus blumei viroid 1 detected from coleus seeds by RT-PCR and Return-PAGE. This is the first report on the occurrence of CBVd in China.
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Subgrouping identification and strain differentiation of two
Cucumber mosaic virus
isolates
XI De-hui, LIN Hong-hui, XIANG Ben-chun
Acta Phytopathologica Sinica 2006, 36 (
3
): 232-237.
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(
101
)
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Based on particular biological characteristics of
Cucumber mosaic virus
beet isolates CMV-XJ1 and CMV-XJ2, detection was done by RT-PCR. RFLP of RT-PCR products showed that, the resulting fragments digested with
Msp
Ⅰ of the two isolates were very similar to isolate belonging to subgroup Ⅰ, but distinct difference appeared when they digested with
EcoR
Ⅰ. Thus
CP
gene of CMV-XJ1 and CMV-XJ2 were cloned. Sequence analysis revealed both were belonging to CMV subgroup IB, there existed differentiation trend between them.
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Induction of resistance to downy mildew by oxalic acid or BTH in cucumber seedlings and the accumulation of pathogenesis-related proteins in intercellular fluids
LI Yu-hong, CHEN Peng, CHENG Zhi-hui, DU Hui-fang
Acta Phytopathologica Sinica 2006, 36 (
3
): 238-243.
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130
)
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The accumulation of pathogenesis-related proteins and disease resistance against downy mildew in cucumber plants were analyzed using BTH and oxalic acid. Local and systemic resistance against downy mildew were both rapidly induced in cucumber plants after treatment with 0.5 mmol/L BTH or 10 mmol/L oxalic acid, and duration of the induction could persist for 15 d. BTH or inoculation both systemically induced three proteins of 33, 27 and 22 kD in intercellular fluids, while oxalic acid did not induce the three proteins. BTH or oxalic acid treatment both induced the increase of POD activities, while no new POD isoenzymes were expressed in treated seedlings. The increase of POD activities was related to induced resistance of cucumber to downy mildew.
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