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Acta Phytopathologica Sinica 2009 Vol.39
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Brief introduction to molecular epidemiology of plant diseases
LUO Yong
Acta Phytopathologica Sinica 2009, 39 (
1
): 1-10.
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This paper briefly introduces the basic concepts of a new field of plant pathology——molecular epidemiology of plant diseases. Molecular biology and biotechnology have been widely used in many areas of epidemiology. In addition to identify the disease-causal pathogens, some molecular approaches have been used to efficiently quantify the initial inoculum causing disease epidemics, demonstrating the advantages over the conventional methods. Population genetics provides useful tools to infer the pathways of pathogen long-distance dispersal and disease spread, and may offer strong evidences of pathogen migration as complement of conventional methods. These bio-techniques have been also used to monitor the spatial and temporal developments of diseases and pathogen populations, to study the pathogen long-term evolution and its effects on disease epidemics, and to reveal the competitions between different pathogen genotypes and the resulting consequences of disease epidemics. Using molecular approaches, screening host resistance will become more efficient. More valuable disease control strategies will become applicable with applications of bio-techniques. Macro-and Micro-approaches will be combined as advantages of methodology, demonstrating a huge potential to promote the research in epidemiology.
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The identification of the pathogen causing tomato powdery mildew
LIU Wei, LIU Shu-yan, LI Yu, JIANG Wen-tao
Acta Phytopathologica Sinica 2009, 39 (
1
): 11-15.
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Powdery mildew was observed on tomato (
Solanum lycopersicum
L.) in the greenhouse in Changchun city, and the pathogen was studied with morphological and molecular methods. Based on the characteristics of conidia, conidiospores and conidia germination, the pathogen was identified as
Oidium neolycopersici
Kiss. Conidia were ellipsoid or cylindrical type, formed singly. Conidiophores were unbranched and hyaline. Foot cell was cylindric, sometimes slightly flexural followed by 1 or 2 cells. The conidia germinated from side and the germ tube terminated in a lobed or a club-shaped appressorium. Appressoria were nipple-shaped or slightly lobed. Chasmothecia were not observed. The rDNA ITS region of the pathogen was amplified by PCR and sequenced. The results showed that the identity was 100% with
O. neolycopersici
by BLAST the sequences in GenBank, which confirmed that the pathogen of tomato powdery mildew collected in Changchun was
O. neolycopersici
.
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A genetic linkage map of
Blumeria graminis
f. sp.
tritici
based on AFLP molecular markers and avirulence genes
XU Zhi, MEI Li-hong, LI Zhi-ying, DUAN Xia-yu, ZHOU Yi-lin
Acta Phytopathologica Sinica 2009, 39 (
1
): 16-22.
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The linkage analysis was conducted on 97 segregating haploid progeny isolates from a cross between 2 isolates, CPW-1 and E17, differed in 8 avirulence genes. The amplified fragment length polymorphism (AFLP) technique was used to construct the genetic linkage map of
Blumeria graminis
f. sp.
tritici
. MAPMAKER/EXP (3.0b) and MapDraw V2.1 were used to construct and draw the linkage map. A total of 117 loci were mapped, comprising 112 AFLP markers and 5 avirulunce genes. The markers were distributed over 10 linkage groups covering a total length of 1 425.1 cM. This was the linkage first map that contain 117 loci in
B. graminis
f. sp.
tritici
. Some AFLP loci which are clustered tightly with a few avirulence genes was reported for the first time. Construction of the linkage map had laid the foundation for locating and cloning avirulence genes and provided the basis for the genetic research of wheat powdery mildew.
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Molecular detection of
Thielaviopsis basicola
by PCR assay
ZHAO Yong-qiang, ZHANG Cheng-ling, ZHANG Wei, LI Lu-ning, ZHANG Guang-min
Acta Phytopathologica Sinica 2009, 39 (
1
): 23-29.
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Based on the differences in internal transcribed spacer (ITS) sequences of
T. basicola
and other tobacco fungal pathogens, a pair of species-specific primers TB-5/TB-3 was designed for
T. basicola
detection. After screening 10 isolates of
T. basicola
and other tobacco fungal pathogens, TB-5/TB-3 primers amplified only a single product of about 400 bp from
T. basicola
. And
T. basicola
could be specifically dectec-ted by PCR assay with TB-5/TB-3 from tobacco tissues infected naturally and soil samples. The sensitivity of detection was 100 fg genomic DNA per 25 μL PCR reaction volume. The PCR-based methods developed here could simplify both plant disease diagnosis and pathogen monitoring, as well as guiding plant disease management.
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Double-stranded RNA elements and their association with pathogenicity of
Sclerotinia sclerotiorum
HUANG Juan, LI Guo-qing
Acta Phytopathologica Sinica 2009, 39 (
1
): 30-35.
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Double-stranded RNA (dsRNA) elements and their pathogenicity of 16 strains of
Sclerotinia sclerotiorum
collected from eggplant grown in Jiamusi of Heilongjiang province, China, were investigated. Transmission of the abnormal hyphal-growth characteristics including slowly-growing and abnormal branchings from 5 hypovirulent strains of
S. sclerotiorum
to virulent strains of the pathogen were determined on agar medium. The results showed that pathogenicity of these strains of
S. sclerotiorum
on detached leaves of oilseed rape (
Brassica napus
) differed greatly. Three pathogenicity types were classified with 7 strains belonging to the strong pathogenicity type (SPT), 7 belonging to the weak pathogenicity type (WPT) and the other 2 belonging to the intermediate pathogenicity type (IPT). dsRNA elements were detected from the mycelia of 10 strains of
S. sclerotiorum
. Three SPT strains contained 7.4 kb dsRNA, six WPT strains contained both 6.4 kb and 7.4 kb dsRNA and one WPT strain contained only 6.4 kb dsRNA. But no dsRNA was detected in 4 SPT strains and 2 IPT strains of
S. sclerotiorum
. Therefore, the 6.4 kb dsRNA was more closely related to virulence atte-nuation (hypovirulence) of
S. sclerotiorum
than the 7.4 kb dsRNA. The results also indicated that the abnormal hyphal-growth characteristics of the five hypovirulent strains of
S. sclerotiorum
could be transmitted to vi-rulent strains of this fungus in a strain-specific manner. This study further suggests the importance of the 6.4 kb dsRNA in association with hypovirulence of
S. sclerotiorum
.
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Cytological examination on interactions between
Mlo
near-isogenic lines of barley and their leaf blight pathogen,
Alternaria tenuissima
LUO Zhen, ZHANG Jing-ze, HU Dong-wei
Acta Phytopathologica Sinica 2009, 39 (
1
): 36-42.
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Recessive alleles of the barley
Mlo
locus confer non-race specific broad-spectrum resistance against all the races of powdery mildew fungus,
Blumeria graminis
f. sp.
hordei
. To assay the biofunction of
Mlo
gene in regulation of plant defense response against different pathogens, the cytological events were examined in the interactions between
Mlo
near-isogenic lines of barley and their leaf blight pathogen,
Alternaria tenuissima
(Fr.) Wiltsh. The results showed that the
Mlo
loss-of-function mutants could enhance resistance to leaf blight pathogen in both papilla-associated resistance and hypersensitive response (HR). The effective papilla, which could arrest the pathogen to invade into barley epidermal cells, was 15% in the wild
Mlo
barley, Ingrid (
Mlo
);and, in contrast, 49%, 51%, 55% in Ingrid
mlo
-3,
mlo
-4, and
mlo
-5 mutants respectively. The HR of the invaded barley epidermal cells might limit the fungal further extension into adjacent mesophyll cells. The percentage of HR in epidermal cells was 64%-69% in
mlo
mutant lines but only 26% in wild Ingrid. These suggested that
Mlo
gene regulate the defense responses by different ways to various pathogens. In addition, it was found that the fungus could also penetrate the barley epidermal cells directly, and its hyphae could also invade and grow in barley mesophyll cells, even in the living ones.
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Genetic diversity of
Magnaporthe grisea
of Hani terrace from Yuanyang county in Yunnan
LIN Jing-jing, LI Jin-bin, LIU Lin, LI Xia, LI Hui-fen, HE Xia-hong, ZHU Shu-sheng, LI Cheng-yun, ZHU You-yong
Acta Phytopathologica Sinica 2009, 39 (
1
): 43-51.
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To determine the genetic diversity and physiological races of the rice blast fungus from Hani terrace of Yuanyang county in Yunnan province, simple sequence repeat (SSR) markers were used to estimate the genetic diversity of isolates of
Magnaporthe grisea
. Sixty-two isolates were studied for physiological races by using the standard differential variety sets developed in Japan for blast resistance in rice. Genetic diversity of rice blast fungus was analyzed with the unweighted pair-groups method using arithmetic averages (UPGMA) method of cluster analysis. Two-hundred isolates were divided into 16 physiological races, 000, 002 and 006 among them were found to be dominant races. The overall genetic diversity of rice blast fungus from Hani terrace of Yuanyang county observed in this study was relatively high (
He
=0.57±0.27, I=1.17±0.60). All isolates were classified into 9 genetic lineages at 0.20 linkage distance level. It was also noticed that genetic diversity of rice blast fungus also varied with altitude. There were 9 races between 1 600 m and 1 700 m in altitude and highly genetic diversity of rice blast fungus populations was observed at the range of 1 400 to 1 500 m (
He
=0.57±0.24). The data strongly suggested that there are significant positive correlations between genetic varieties of rice blast fungus and the traditional rice varieties cultivated over decades in Yuanyang Hani terrace.
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Changes of reactive oxygen species and protective enzymes in the interaction of wheat and
Puccinia striiformis
f. sp.
tritici
WANG Chen-fang, HUANG Li-li, ZHANG Hong-chang, HAN Qing-mei, ZHU Lin, FENG Hao, KANG Zhen-sheng
Acta Phytopathologica Sinica 2009, 39 (
1
): 52-60.
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Histological characteristics of pathogen development, production of reactive oxygen species (ROS) and activities of relative enzymes were analyzed in the incompatible and compatible interactions between wheat and
Puccinia striiformis
f. sp.
tritici
. Histological observation revealed that there were distinct differences between the incompatible interaction and compatible interaction, which included inhibition of hyphal growth, formation decrease of haustorial mother cells and haustoria, and hypersensitive cell death in host tissues occured at 18 h after inoculation (hai) in incompatible ones. The results of biochemical measuration showed the rate of O
2
-
production and content of H
2
O
2
were higher in the incompatible interaction than that in the compatible interaction, and the peaks of O
2
-
appeared at 12 hai, H
2
O
2
content reached its maxima at 20 hai and 72 hai. However, in the compatible interaction, the rate of O
2
-
production were lower or similar to control, and H
2
O
2
content were higher than that in control but lower than in incompatible ones. The SOD activities in compatible interaction were usually higher than that in incompatible ones. At 24 hai, the CAT activities in both interactions were all higher than that in control, and CAT activities in compatible interaction were higher than that in incompatible ones at 36 hai and 48 hai, but after 60 hai, CAT activities in compatible interaction were lower than that in compatible ones again. The POD activities increased obviously in both interactions at 24 hai, but more rapidly in compatible ones. The MDA contents were increased significantly at 72 hai in incompatible interaction. The results indicated that there were striking differences about pathogen development, ROS production and relative enzymes activities in the incompatible and compatible interactions, which might have close relationship with resistance expression of wheat against stripe rust fungus.
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Identification and SSR mapping of a stripe rust resistance gene in wheat line ICA56
PU Zong-jun, CHEN Guo-yue, Chen Hua, ZHENG Ke, WEI Yu-ming, YAN Ze-hong, YANG Wu-yun, ZHENG You-liang
Acta Phytopathologica Sinica 2009, 39 (
1
): 61-66.
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A wheat line, ICA56, carried a novel single dominant candidate gene conferring high resistance to stripe rust races CYR30, CYR31 and CYR32. By using allelic test, it was found that this novel resistance gene in ICA56 was different from
Yr5, Yr10, Yr15
and
Yr26
and was designated as
YrICA56
. Five microsatellite markers were linked to the resistance gene
YrICA56
with genetic distance
WMC503
-16.6 cM,
Xgwm296
-7.0 cM,
Xgwm261
-10.4 cM,
WMC112
-4.5 cM and
Xgwm210
-14.1 cM based on the F
2
population from Chuanmai28/ICA56. The order of centromere, marker primers and gene was -
WMC503-Xgwm261-Xgwm296-YrICA56-WMC112-Xgwm210
-centromere-. Based on the results of Mapmaker 3.0 and MapDraw 2.0, the resistance gene
YrICA56
was located on 2DS. The stripe rust resistance genes
Yr16
and
YrKat
have been located on 2DS, while
Yr16
is an adult resistance gene and
YrKat
is temperature sensitive. Therefore, it is suggested that
YrICA56
might be a new stripe rust resistance gene.
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Genetic analysis and SSR molecular mapping of translocation line V9128-3 derived from
Triticum aestivum-Haynaldia villosa
resistance to stripe rust
HOU Lu, SONG Xiao-he, LU Ya-ming, HU Mao-lin, HE Miao-miao, JING Jin-xue, WANG Bao-tong
Acta Phytopathologica Sinica 2009, 39 (
1
): 67-75.
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The
Triticum aestivum-Haynaldia villosa
translocation line V9128-3 was inoculated with seven dominant races of
Puccinia striiforms
f. sp.
tritici
prevalent in China, the results of resistance evaluation showed that the translocation line V9128-3 possessed resistance to the current epidemic yellow rust races. V9128-3, susceptible cultivar Mingxian 169 and their progeny of F
1
, F
2
, BC
1
F
1
, F
3
were inoculated with race Su-4, one of the F
2
progeny were used for developing molecular markers of stripe rust resistence gene in V9128-3, a portion of BC
1
F
1
individuals and F
3
lines were used to validate the the linked markers. The results of inheritance analysis showed that V9128-3 resistance to Su-4 was controlled by one dominant gene. Two markers Xgwm356 and Xwmc658 located on 2AL from 219 SSR primer combinations were found linked to
YrHV
(temporarily designated).
YrHV
was 8.5 cM from Xgwm356 and 5.6 cM from Xwmc658, respectively, the two sites linked to
YrHV
were validated by a portion of BC
1
F
1
individuals and F
3
lines. These markers would be used for breeding new wheat cultivars with marker-assisted selection.
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Specificity and stability of E-chromosome specific SCAR marker from
Thinopyrum
spp. for
Lr19
YAN Hong-fei, YANG Wen-xiang, CHEN Yun-fang, MENG Qing-fang, LIU Da-qun
Acta Phytopathologica Sinica 2009, 39 (
1
): 76-81.
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Leaf rust resistance gene
Lr19
transferred from
Thinopyrum elongatum
into wheat cultivars has expressed resistance to most pathotypes of Puccinia triticina in China. To identify the molecular marker linked to
Lr19
, a segregating F
2
population from a cross between the resistance parent TcLr19 and susceptible parent Thatcher were screened. A SCAR marker cosegregating with
Lr19
was found and named as Y
19
SCAR
982
. The result of stability validation test on the 49 international set of near-isogenic lines in Thatcher background suggested that Y
19
SCAR
982
was specific and sufficient for
Lr19
. The detection of the marker in 120 wheat varieties indicated that it could be effectively used for MAS in breeding of the resistance to leaf rust in wheat.
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Parasitic fitness of the major epidemic strains of
Puccinia striiformis
f. sp.
tritici
in China
WANG Bao-tong, LI Gao-bao, LI Qiang, WANG Fang, SHI Ya-qian, LIU Qian-ru, KANG Zhen-sheng
Acta Phytopathologica Sinica 2009, 39 (
1
): 82-87.
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In order to predict the future predominant isolates in the populations of
Puccinia striiformis
f. sp.
tritici
in China, parasitic fitness of current prevalent isolates were estimated through testing resistant components. The results showed that the sporulation capacity contributed to most important portion in parasitic fitness, and the next two important characters for rust fungal parasitic fitness were infectivity (represented by number of colonies) and latent period. Germination ability didn't show significant difference among the tested races. The mathematical models had been firstly developed to estimate three principal components of pathogen parasitic fitness:sporulation capacity, infectivity and latent period. According to these models, the relative parasitic fitness of isolates Su11-4, Su11-14 and CY32 was higher than that of other tested races and had already been the predominant races at the present time. Isolate CY31 showed lower parasitic fitness, its occurrence frequency had been decreasing recent years and it was becoming secondary race. Also, for the lower parasitic fitness, the new pathogenic type "T
4
" infected the seedling of differential host "Zhong 4" couldn't become the prevalent race in the near future.
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Detection and molecular identification of a
Potyvirus
isolate infecting
Amorphophallus rivieri
Durieu in Yunnan province
LUO Yan-qing, DING Ming, FANG Qi, DONG Jia-hong, WANG Ling, LI Yong-jun, ZHANG Zhong-kai
Acta Phytopathologica Sinica 2009, 39 (
1
): 88-90.
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YN80 was isolated from
Amorphophallus rivieri
Durieu showing mosaic and crinkle symptoms in Songming, Yunnan province. Flexuous filamentous particles were found in diseased leave sap and pinwheel inclusion bodies were found in the leave tissue. YN80 had positive reaction to universal antibody of Potyvirus by DAS-ELISA. 3'-terminal sequence of YN80 was cloned and sequenced.
cp
gene of YN80 consisted of 987 nt, encoded 328 aa (36.1 kDa). Sequence analysis showed that YN80 shared the highest identity (97.0%)with CP amino acid sequence of
Dasheen mosaic virus
(DsMV). These data indicated that YN80 was an isolate of DsMV. This is the first molecular identification of
A. rivieri
Durieu isolate of DsMV in China.
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Detection and identification of seed transmitted virus from imported cowpea germplasm
CHEN Qing, LIN Shi-ming, CHEN Hong-yun, LIAO Fu-rong, YU Fang-ping, CHEN Hong-jun, ZHU Shui-fang
Acta Phytopathologica Sinica 2009, 39 (
1
): 91-94.
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114
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Imported cowpea seeds were detected with growing test, ELISA assay and RT-PCR method. The ELISA results showed that cowpea seedlings with symptoms reacted positively with antibody against
Southern bean mosaic virus
(SBMV). The 979 bp of fragment could be amplified from two positive ELISA samples using primers specific for
Southern cowpea mosaic virus
(SCPMV), and the sequence determination results proved that the pathogen existing in imported cowpea seeds was SCPMV. The positive ELISA results with SBMV antibody could be further confirmed by RT-PCR amplification with specific primers designed to amplify the coat protein gene and 3' noncoding region of SCPMV and SBMV. The RT-PCR method presented here was suitable for molecular identification of SBMV and SCPMV in entry-exit plant quarantine laboratories.
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Polyclonal antibody preparation against prokaryotic expression products of
Rice stripe virus
NS2
gene and detection of NS2 in infected rice and planthoppers
XIONG Ru-yi, WU Jian-xiang, ZHOU Yi-jun, ZHOU Xue-ping
Acta Phytopathologica Sinica 2009, 39 (
1
): 95-99.
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The
NS2
gene of
Rice stripe virus
(RSV) was amplified by RT-PCR, cloned into pGEM-T vector and sequenced. The
NS2
gene was inserted into prokaryotic expression vector pET32a to produce recombinant plasmid pET32a-NS2. The recombinant plasmid was introduced into
Escherichia coli
strain BL21 (DE3) pLysS. SDS-PAGE and Western blot analysis confirmed that NS2 fusion protein was expressed after induction by IPTG. The recombinant NS2 protein was purified with Ni
2+
-NTA agarose affinity chromatography and the polyclonal antibody against NS2 protein was raised in rabbit. NS2 protein was successfully detected in small brown planthopper (
Laodelphax striatellus
) at 1:1 600 dilution of the total protein of single planthopper and in infected rice (
Oryza sativa
) at 1:800 dilution of 10 mg leave by dot immunobinding assay using the polyclonal antibody.
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Prokaryotic expression and preparation of antiserum of
Banana streak virus
ORFⅡ gene
HE Yun-wei, CHEN Xiu, RUAN Xiao-lei, LIU Fu-xiu, LI Hua-ping
Acta Phytopathologica Sinica 2009, 39 (
1
): 100-103.
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ORFⅡ gene of
Banana streak virus
GuangDong isolate (BSV-GD) was amplified from a BSV-GD recombinant plasmid by PCR, and the gene was expressed by being cloned into prokaryote expression vector pET-28b (+). The fusion protein was about 16.5 kDa in size and was soluble with SDS-PAGE analysis. The purified protein was obtained by using the histidine labeling kit of N-terminus of protein. The antiserum was obtained by immunizing healthy rabbits with the purified protein. Western blot and ELISA analysis showed that the special antiserum of BSV possessed high titer, which was tested as 1:51 200. The study was a base for further research on BSV including ORFⅡ gene function and virus detection.
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Effect of nitrogen dosage and fertilization approach on the occurrence of sheath blight disease in super hybrid rice(SHR)
HUANG Shi-wen, WANG Ling, CHEN Hui-zhe, WANG Quan-yong, ZHU De-feng
Acta Phytopathologica Sinica 2009, 39 (
1
): 104-109.
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The experiments of resistance of different super hybrid rice (SHR) combinations to sheath blight (ShB) (
Rhizoctonia solani
Kühn) and effect of nitrogen fertilizer (NF) dosage and fertilization methods on ShB occurrence were conducted in Hangzhou during 2005-2006. The results indicated that the resistance level of different SHR combinations to ShB were significantly different. For the same combination, the severity of ShB depends on the seeding and transplanting period. The disease index showed a positive correlation with the nitrogen dosage, but depended on resistance level of combination. The ShB severity of susceptible combination showed high positive correlation with NF dosage. At the flowering stage, there were no effect of nitrogen fertilization method on the occurrence of ShB, but the fertilization method showed significantly effect at dough stage. The occurrence of ShB was significantly affected by the supply rate of nitrogen at different rice growing stage. When the total NF supply was 165 kg per hectare, the occurrence of ShB with high NF rate (80%) at early stage (as basal and tillering fertilizer) and low rate (20%) at late stage (as panicle fertilizer) was more serious than that of low NF rate (60%) in early and high NF rate (40%) as panicle fertilizer. The result was the reverse of conventional viewpoint about that high NF supply at rice late growing stage might lead to severe occurrence of ShB.
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Progress on chorismate mutase gene of plant parasitic nematodes
HUANG Wen-kun, PENG De-liang, HE Wen-ting
Acta Phytopathologica Sinica 2009, 39 (
2
): 113-117.
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Parasitism genes encoding secretory proteins expressed in oesophageal glands of plant parasitic nematodes play critical roles in invasion, establishment of feeding sites and suppression of host defenses. Seve-ral chorismate mutase (CM) genes have been isolated and identified from
Meloidogyne incognita and M. javanica
oesophageal gland-region cDNA library and from homology-based cDNA cloning of
M. arenaria
. These chorismate mutases with amino-terminal signal peptides are significantly similar to that of
Globodera pallida
,
Heterodera glycines
and bacteria. In-situ mRNA hybridization showed that the transcripts of CM accumulate specifically in the two subventral oesophageal gland cells of
Meloidogyne
species. RT-PCR analysis confirmed that their transcript abundances were high in the early parasitic juvenile stages, and low or undetec-table in later parasitic stages of the nematode. Southern blot analysis revealed that these CM genes were members of a small multigene family in plant parasitic nematodes. The widespread presence of CMs in specialized se-dentary endoparasitic nematode species suggests that this multifunctional enzyme may be a key factor in modulating plant parasitism.
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Morphological and molecular identification of seedborne
Fusarium
of watermelon and its effect on seed germination
WU Xue-hong, HAN Lu-ming, CHEN Qian, LI Huai-fang, GU Qin-sheng
Acta Phytopathologica Sinica 2009, 39 (
2
): 118-124.
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An isolate of
Fusarium
sp. was obtained from seed coat of watermelon (cvs. Jingxin No.1 and Xinjingxin No.1) using seed washing test and PDA plate methods. The isolate was identified through morphological observation and molecular detection. Effects on the seed germination were also studied. After observation of morphology, color and growth rate of the colonies, and morphology of macroconidia, microconidia, chlamydospores and conidiophores, it was preliminarily identified as
Fusarium oxysporum
. DNA of the fungus was amplified by universal primers of fungal rDNA ITS, specific primers of genus
Fusarium
rDNA ITS and specific primers of
F. oxysporum
rDNA ITS, respectively. After PCR products were ligated, transformed and confirmed, inserted sequences of the recombinant plasmids were analyzed. The sequencing results were logged in GenBank to BLAST. The results of molecular detection and morphologic observation all showed that the
Fusarium
isolate should be
F. oxysporum
. It is the first report of seedborne
F. oxysporum
isolated from seed coat of watermelon in China. Moreover, the germination energy, percentage germination and germination index of watermelon seeds all decreased significantly after treated with the spore suspension of seedborne
F. oxysporum
.
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Morphological and genetic analysis on different populations of
Ditylenchus destructor
HUANG Jian, QI Long-jun, WANG Jin-cheng, LI Hong-mei, SONG Shao-yi, WANG Hong-bao, LIN Mao-song
Acta Phytopathologica Sinica 2009, 39 (
2
): 125-131.
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ITS1 (internal transcribed spacer 1) regions were amplified from 13 Chinese populations of
Ditylenchus destructor
and one Dutch population of Ditylenchus dipsaci. ITS1 regions of these populations were digested by five enzymes
Rsa
Ⅰ,
Hae
Ⅲ,
Msp
Ⅰ,
Hinf
Ⅰ and
Alu
Ⅰ. ITS1-RFLP patterns revealed that two patterns existed in 13 Chinese populations of
D. destructor
with different fragments obtained by four enzymes
Rsa
Ⅰ,
Hae
Ⅲ,
Hinf
Ⅰ and
Alu
Ⅰ, and ITS1-RFLP patterns of
D. dipsaci
and
D. destructor
were different in fragments obtained by all five enzymes. 13 Chinese populations of
D. destructor
were divided into two genotypes, i.e. genotype A and B. Genotype A included populations of DeSD1, DeSD2, DeSD3 and DeJS1, and genotype B included populations of DeAH1, DeAH2, DeHB1, DeHB2, DeJS2, DeSX, DeSD4, DeTJ1 and DeTJ2. ITS1 regions were also sequenced and the alignments showed that the pairwise sequence divergences of four populations in genotype A were between 1% and 4%, and that of nine populations of genotype B were 0 and 1%, and the sequence divergences of
D. dipsaci
and
D. destructor
were 39% and 48%. Morphometric characters were analysed on four populations of
D. destructor
and one population of D. dipsai. The results demonstrated that no significant difference in most morphometric characters except c, tail, V and V' among populations of two genotypes A and B of
D. destructor
. The ITS1-RFLP patterns, ITS1 sequence analysis and morphometric data supported that two genotypes of
D. destructor
were existed in China.
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Effect of sugar on germination of thin-wall conidia of
Ustilaginoidea virens
ZHANG Jun-cheng, CHEN Zhi-yi, WANG Zhong-wen, LIAO Yong-mei, LAN Shao-ming
Acta Phytopathologica Sinica 2009, 39 (
2
): 132-138.
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94
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Effect of ten kinds of sugars on germination of thin-wall conidia of
Ustilaginoidea virens
(Cooke) Takahashi was determined with agar plate. The sugars were xylose, sorbose, ribose, fructose, mannose, galactose, maltose, glucose, lactose and sucrose. All the sugars exhibited inhibition to the conidia germination in varying degree at 1% concentration, except for sucrose. Inhibition of xylose, fructose, sorbose and ribose was very strong. The viability was not lost in the case that the conidia were treated with xylose or fructose for 6 h. Mixture of several sugars also showed inhibition to the conidia. Two completely different effects were exhibited from the mixture of each sugar and potato juice which was of stimulation to the conidia germination. One was that the inhibition of mannose, glucose, maltose, galactose, lactose and sucrose was covered up by the stimulation of the potato juice. The another was that the stimulation of the potato juice was covered up by the inhibition of xylose, fructose, sorbose and ribose. The results showed that germination of the thin-wall conidia could be controlled by external sugars and certain bioactive substances.
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Cloning and expression analysis of alanine aminotransferase gene
TaAlaAT1
in wheat infected with stripe rust fungus
DUAN Ying-hui, GUO Jun, WANG Shu-juan, YU Xiu-mei, HUANG Li-li, KANG Zhen-sheng
Acta Phytopathologica Sinica 2009, 39 (
2
): 139-146.
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There is increasing evidence that some genes encoding aminotransferase associated with plant carbon and nitrogen metabolism also play critical roles in the induction of plant defense against pathogens. An EST, homologous to the rice alanine aminotransferase gene, was isolated from an incompatible suppression subtractive hybridization (SSH) cDNA library of wheat leaves infected with
Puccinia striiformis
f. sp.
tritici
. Using in silicon cloning and RT-PCR, a 1 563 bp cDNA sequence was obtained from wheat and designated
TaAlaAT1
. Sequence analysis showed that
TaAlaAT1
included a complete 1 440 bp ORF and encoded a putative protein composed of 479 amino acids. The deduced amino acid sequence was revealed the presence of the conserved aminotransferase signature and highly homologous to alanine aminotransferase in
Oryza sativa
,
Vitis vinifera
,
Glycine max
,
Arabidopsis thaliana
and
Medicago truncatula
. The expression pattern of
TaAlaAT1
at transcription level was investigated by semi-quantitative RT-PCR and real-time PCR, respectively, which revealed that
TaAlaAT1
transcripts were up-regulated in incompatible interaction of wheat and stripe rust, whereas down-regulated in compatible interaction, and apparently different between incompatible and compatible interaction. It was speculated that
TaAlaAT1
was involved in wheat defense response to P. striiformis.
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Elicitor-inducible activity of P3 deletion in promoter of the gene encoding barley β-1,3-glucanase isozyme GⅢ in transgenic rice
LI Yun-feng, HU Chuan, CAO Yan, ZHANG Zhi-hui, WANG Zhen-zhong
Acta Phytopathologica Sinica 2009, 39 (
2
): 147-152.
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119
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P3 deletion of β-1, 3-glucanase isoenzyme GIII gene promoter was ligated upstream into the
gus
report gene and P3/
gus
fusion fragment was then cloned into a binary vector pCAMBIA1300 for
Agrobacterium-mediated
transformation of rice (
Oryza sativa
L. cv. Taipei 309). PCR analysis indicated that the fusion gene was presented in 10 T
0
transgenic plants. The integration of the genes in rice genomic DNA was further confirmed by Southern blot. The results showed that 9 plants contain the fusion gene. Histochemical staining and spectrofluorophotometric analysis of transgenic rice leaves showed that the GUS activity was increased after treatment with the fungal elicitor from
Magnaporthe griea
. Histochemical staining of T
1
rice seeds displayed marked GUS activity after induction with the elicitor, while no GUS activity was detected in untreated T
1
rice seeds.
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Construct of plant safety expression vector harboring two pathogen inducible promoters
WANG Dan-dan, WANG Rong, TANG Li-li, LIU Ai-xin, KONG Wei-wen
Acta Phytopathologica Sinica 2009, 39 (
2
): 153-159.
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Plants are often subjected to infections of various pathogens in their whole life. This is so called complex infections. Complex infections of pathogens are challenged for genetic engineering of plant disease resistance. In this study a plant safety expression vector was constructed. The vector harbored twin T-DNAs and the selective marker gene
NPT
Ⅱ expression cassette was separated in different T-DNAs from the GUS expre-ssion cassette in which two highly pathogen-specific inducible promoters, EAS4 and hsr203J, were used to drive report gene. Transgenic plants were obtained from the transformation of tobacco by the vector. The GUS activity could not be detected or was very low in the transgenic tobacco plants without induction. Whereas the GUS activity was much higher when the plants were treated with parasiticein or inoculated with spore suspensions of
Phytophthora nicotianea
[0] and
Ralstonia solanacarum
. The results showed that the two promoters in transgenic plants were highly pathogen-specific inducible and could be used as a powerful tool for genetic engineering in plant disease resistance.
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Screening of
Agrobacterium tumefaciens
-mediated pathogenic mutants of
Magnaporthe grisea
ZHOU Hui-ping, WU Yi-xin, Gento TSUJI, Yasuyuki KUBO, HE Yue-qiu
Acta Phytopathologica Sinica 2009, 39 (
2
): 160-167.
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By using
Agrobacterium tumefaciens
-mediated transformation, more than 5 000 transformants were obtained from
Magnaporthe grisea
CY2, an isolate with very weakly pathogenic to rice. Among 30 pathogenic mutants were screened by inoculation with mixed spore suspension of 20-30 transformants onto the near-iso-genic lines (NIL) contained 25 rice blast resistance genes. Mutation had quite different frequency at different pathogenicity-related loci for the pathogen. No any mutants were found from lines with the other resistance genes while as many as 14, 7 and 2 mutants were found from the line F128-1 carrying
Pi-ta
2
, the line IRBL-2 carrying
Pi-a
and the line IRBL-4 carrying
Pik-s
, respectively. It was indicating that T-DNA might have insert hot spot in the pathogen. The mutants showed different pathogenic types on the NILs with the same blast resistance gene and it implied that the NILs might carry other resistance genes. LTH, a line without any blast resistance genes considered commonly, might have resistance genes depending on the fact that 7 mutants were harvested from it and could not infected with the wild type CY2.
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Comparison of cytopathological changes of plant hosts infected with two
Broad bean wilt virus 2
isolates PV131 and P158
LIU Cheng-ke, LI Yan-hong, WANG Wei-bing, HONG Jian, ZHOU Xue-ping
Acta Phytopathologica Sinica 2009, 39 (
2
): 168-173.
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108
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Both the
Chenopodium quinoa and Vicia faba
were respectively infected with two
Broad bean wilt virus 2
(BBWV-2) isolates, PV131 and P158, and their cytopathological changes were observed by transmission electron microscope. In the PV131 isolate infected
C. quinoa
cells, the membrane proliferated and contained vesicles and electron-dense materials. The extensive proliferation of membrane might act as the viral replication center. Viral particles distributed in the cytoplasm and some of them accumulated into crystals or aggregated into tubules. The diameter of the tubule was about 75 nm and there were nine viral particles on the transverses section. The similar data were got from the other three kinds of infected mesophyll cells but PV131 and P158 virions did not accumulate into crystals in
V. faba
cells. All the observations indicated that the differences of pathogenicity between PV131 and P158 isolate were determined by their genome but not the host types.
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Rapid identification technology of resistance to rice sheath blight in seedling stage
WANG Zi-bin, ZUO Shi-min, LI Gang, CHEN Xi-jun, CHEN Zong-xiang, ZHANG Ya-fang, PAN Xue-biao
Acta Phytopathologica Sinica 2009, 39 (
2
): 174-182.
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132
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In order to establish a rapid identification technology of resistance to sheath blight (SB) in rice seedling stage,five cultivars with different resistance to SB were adopted in identification of seedling stage in artificial climate incubator or temperature-controlled greenhouse and the results were verified through an experiment at rice adult stage in field.The results showed that about 85% relative humidity was suitable for SB mycelium to develop infection structures and infect rice seedlings.The SB resistance levels among 5 cultivar seedlings differed significantly at 1% levels and could be divided into two groups,relatively susceptible (Lemont,Wuyujing 3) and relatively resistant (YSBR1,Jasmine 85,Teqing).The symptom severe degrees of seedlings at different leaf-age (4-leaf stage or 5-leaf stage) were significantly different and the average disease rating at 4-leaf stage was significantly higher than that of 5-leaf stage.The differences of resistance among different cultivars in greenhouse were less than that in the field,but the resistant-to-susceptible order among the cultivars were consistent with that in the field.Rapid identification technology of rice SB resistance in seedling stage could be used for screening resistance of rice germplasm on a large-scale scope or primary resistance identification.
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Case analysis of long-distance transports of
Puccinia striiformis
f.sp.
tritici
in China using HYSPLIT-4 model
WANG Hai-guang, YANG Xiao-bing, MA Zhan-hong
Acta Phytopathologica Sinica 2009, 39 (
2
): 183-193.
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114
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Wheat stripe rust, caused by
Puccinia striiformis
f.sp.
tritici
, is one of the most important wheat diseases in China. The level of the disease epidemics is determined by long-distance transport of the pathogen. The key to predict the pandemic of wheat stripe rust is to predict the pathway of long-distance transports of the pathogen. Since air current is the main driving factor for its dispersal, physical models of atmospheric dyna-mics provide powerful tool to analyse the long-distance transports. In this study, historical cases of long-distance transports of the wheat stripe rust pathogen were analysed using HYSPLIT-4 model. The results indicated that the occurrence of wheat stripe rust epidemics in deposition regions was consistent with air parcel movements from the source regions. Besides dry deposition caused by gravity, spore deposition was affected, to a great extent, by the wet deposition from precipitations. Our results suggested that HYSPLIT-4 model could be used to quantify the long-distance transports of
Puccinia striiformis
f.sp.
tritici
, and provided a new approach for seasonal forecast of the regional outbreaks of wheat stripe rust in China. The approach demonstrated in our case should be methodologically and technically useful to study long-distance transports of other airborne pathogens.
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Spatial dynamic model of gray leaf spot of maize epidemic and its theoretic spread distance
XUE Teng, LI Hai-chun, ZHOU Ru-jun, LIU Bo, FU Jun-fan
Acta Phytopathologica Sinica 2009, 39 (
2
): 194-202.
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122
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According to the principle of plant disease epidemiology, the spatial dynamics of gray leaf spot of maize was studied by artificial inoculation to cause the disease gradient in experimental fields. The spatial dynamic models of gray leaf spot of maize were established by SAS 9.13. The results showed that:1. Exponential Model and GOMPERTZ Model were the optimum One-Dimensional Model in Shenyang region; 2. Gau-ssian Model was the optimum Two-Dimensional Model; 3. Circular Model and Oval Model were the optimum 3-Dimensional Model. According to the spatial dynamic models, the theoretic spread distances of gray leaf spot of maize were in a range of 20 to 50 m.
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Molecular identification of the pathogen of sugarcane mosaic disease in Jiangxi province
JIANG Jun-xi, XIE Yan, QUE Hai-yong
Acta Phytopathologica Sinica 2009, 39 (
2
): 203-206.
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108
)
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Sugarcane mosaic disease, caused by
Sugarcane mosaic virus
(SCMV),
Sorghum mosaic virus
(SrMV),
Maize dwarf mosaic virus
(MDMV) or
Johnsongrass mosaic virus
(JGMV) in
Potyvirus
, is one of the most important viral diseases of sugarcane. In the study, four primer pairs specific to SCMV, SrMV, MDMV and JGMV, respectively, were designed and used to detect 29 sugarcane leaf mosaic samples collected from 9 locations in Jiangxi province. The representative RT-PCR products were sequenced. The results showed that 22 samples were infected by SCMV, three by SrMV, and four were mix-infected by SCMV and SrMV. MDMV or JGMV were not identified in all samples. The result indicates that SCMV is the major pathogen of sugarcane mosaic disease in Jiangxi province, and SrMV is also a pathogen for the disease.
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Detection and identification of citrus viroid-Ⅲ
MA Xian-feng, LI Fang, HU Chun-hua, HAN Jian, DAI Su-ming, ZENG Bai-quan, DENG Zi-niu
Acta Phytopathologica Sinica 2009, 39 (
2
): 207-211.
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97
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Total RNA was isolated from phloem of young shoots and retro-transcripted to cDNA by RT-PCR(Reverse Transcriptase-Polymerase Chain Reaction) with specific primer pair of CVd-Ⅲ (citrus viroid-Ⅲ), the results of molecular detection indicated that the CVd-Ⅲ specific bands, about 300 bp, were detected in 27 of the 49 samples collected from different counties in Hunan Province and 1 sample presented by Catania University. All the amplified cDNA fragments were cloned and sequences, sequence analysis compared with the reported CVd-Ⅲ sequences in GenBank showed that:sequences of 21 samples were the same and completely identical with CVd-Ⅲb (AF184147); however, the sequences of the other 6 samples and presented sample were diversified from the reported CVd-Ⅲ sequences in GenBank.
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Sequence analysis of 16S ribosomal DNA of phytoplasma associated with periwinkle yellows disease in Hainan
CHE Hai-yan, LUO Da-quan, FU Rui-yi, YE Sha-bing, Wu Yun-feng
Acta Phytopathologica Sinica 2009, 39 (
2
): 212-216.
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101
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Periwinkle(
Catharanthus roseus
) yellows is a common disease in Hainan. Periwinkle's leaf tissue with symptoms was assayed for phytoplasma infection by using PCR assay employing phytoplasma universal 16S rRNA gene primers (Rl6mF2/Rl6mR1). A PCR product (about 1.4 kb) was amplified from periwinkle showed yellows. Nucleotide sequencing and phylogenetic tree analysis showed that the amplified 16S rDNA contained 1 432 nucleotides, the most homology was 98.1% with the members of elm yellows group (16S r Ⅴ) and clustered in the same clade, while it was under 96.1% with other phytoplasma groups. Our results suggested that the phytoplasma sample belonged to 16S rⅤgroup and was tentatively named as Hainan periwinkle yellows phytoplasma (PY-Hn). This is the first report of existence of 16S r Ⅴ group phytoplasma in naturally infected periwinkle.
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Cloning and characterization of a LRR-receptor-like protein kinase gene from
Triti-cum turgidum
NIU Ji-shan, CHANG Yang, LIU Rui, NI Yong-jing
Acta Phytopathologica Sinica 2009, 39 (
2
): 217-220.
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132
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Near the HMW-glutenin gene of wheat (
Triticum aestivum
), there is a locus (temporarily named
TaXa
) encoding LRR-receptor-like protein kinase, which is homologous to disease resistance protein Xa21 of rice (
Oryza sativa
). Through RT-PCR approach, a cDNA clone of ZS2002 was isolated from the orthologous locus of
TaXa
in
Triticum turgidum
.
ZS2002
was 3 081 bp long and encoding a peptide composed of 1 026 amino acid. The protein included N-terminal conserved sequence, LRR domains, a transmembrane region and a serine/threonine protein kinase domain.
ZS2002
was expressed in root, stem, leaf and spike. The transcribing in seedling leaves was significantly enhanced by
Blumeria graminis
f.sp.
tritici
.
TaXa
gene might play a role in powdery mildew resistance reaction in
Triticum
.
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Screening,identification and control efficacy of sugar beet antagonistic endophytic bacteria against
Cercospora beticola
SHI Ying-wu, LOU Kai, LI Chun, WANG Hong-gang, JIANG Yu-li
Acta Phytopathologica Sinica 2009, 39 (
2
): 221-224.
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115
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Three hundred and one endophytic bacteria strains were isolated from healthy sugar beet plants in severely diseased plots in Changji County,Xinjiang Province.Three endophytic bacteria strains,1-5,4-1 and 4-3,showed relatively strong antagonistic against
Cercospora beticola
.Strain 1-5 was identified as Paenibacillus polymyxa,while strains 4-1 and 4-3 were as
Bacillus flexus
and
Stenotrophomonas
sp. by their morphological,physiological and biochemical characteristics.The results from several experiment trials showed that the endophytic bacteria could reduce the disease incidence of sugar beet.The control efficiency reached from 67.6% to 80.2%, indicating that biocontrol with endophytic bacteria was an alternative and potential method to control sugar beet fungi disease.
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Isolation and identification of the pathogens of jujube (
Zizyphus jujuba
cv. Huping) fruit shrink disease in Shanxi
XU Xiang-bin, LAI Tong-fei, JING Yun-fei, XU Yong, TIAN Shi-ping
Acta Phytopathologica Sinica 2009, 39 (
3
): 225-230.
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184
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Huping jujube fruit in Shanxi province suffered serious losses from shrink disease during 2005-2008.In this study,the genomic DNAs of fungi and bacteria isolated from decayed jujube fruits were amplified by polymerase chain reaction(PCR) using the universal primers of the fungus ITS rDNA and bacterium 16S rDNA,and the nucleotide sequences of the amplified fragments were tested and then analyzed by using Megablast in GenBank.The main parasitical fungi and bacteria isolated from fruits were identified as
Alternaria alternata
,
Irpex lacteus
,
Penicillium expansum
,
Cladosporium tenuissimum
,
Bacillus subtilis
,
B.megaterium
,
B.pumilus
,and
Paenibacillus polymyxa
.After inoculating the jujube fruits with these parasitical mi-croorganisms,only the fungi of
A.alternata
,
P.expansum
and
C.tenuissimum
showed high pathogenicity,and no bacteria were capable of inciting the disease.
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Genetic diversity and variability of
Xanthomonas oryzae
pv.
oryzae
in Guang-dong
ZENG Lie-xian, CHEN Shen, ZHANG Hui, PAN Ru-qian, YANG Jian-yuan, WU Sheng-yuan, ZHAI Pei-ru, ZHU Xiao-yuan
Acta Phytopathologica Sinica 2009, 39 (
3
): 231-237.
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109
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Genetic diversity and variability of
Xanthomonas oryzae
pv.
oryzae
(Xoo) strains collected from Guangdong were analyzed by using IS-PCR and rep-PCR fingerprinting techniques.Genomic DNA from 114 strains was amplified with two specific primers J3 and ERIC,89 and 40 haplotypes were revealed respectively.Dendrograms were generated from the data by using UPGMA analysis.The strains tested were similar each other at a level of 70%,eleven and eight clusters were gruoped with J3 and ERIC respectively.The predominant groups were both of the cluster 1 for each primer J3 and ERIC involving 89(78.07%) and 52(46.61%) strains,respectively.The genetic diversities of the population of tested strains were 0.891 9(for J3) and 0.827 8(for ERIC),respectively.The results indicated that the genetic diversity of Xoo in Guangdong was various.114 strains were inoculated with six differential cultivars including near-isogenic rice lines carrying single resistance gene,IRBB14(
Xa14
),IRBB13(
xa13
),IRBB4(
Xa4
),IRBB203(
Xa3
),IRBB5(
xa5
),and a highly susceptible cultivar Jingang 30.Six races,X-gd1,X-gd2,X-gd3,X-gd4,X-gd5 and X-gd6 were identified.Among them,X-gd4 was predominant in Guangdong province.
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Isolation and identification of bacterial pathogen causing wilt on pea seed imported from Australia
CUI Ru-qiang, HU Xue-nan, LIAO Jin-ling, ZHONG Guo-qiang, GUO Quan, WANG Wei-fang, FENG Li-xia, ZHAO Li-rong, WU Hai-rong, HU Jia
Acta Phytopathologica Sinica 2009, 39 (
3
): 238-242.
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108
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Three isolates were isolated from diseased seedling stems of pea imported from Australia in March 2008.Inoculation on pea seedlings with these isolates caused the same symptoms as naturally infected plants,while symptoms did not occur on control plants(inoculated with sterile water).The bacteria sharing the cha-racteristics of the inoculated isolates were recovered from symptomatic plants,hence fulfilling Koch’s postulates.All three isolates were identified as
Erwinia persicina
by pathogenicity,staining reactions,morphological characteristics,culture patterns,physiological and biochemical reactions,and 16S rDNA gene sequences.
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Identification of a new bacterial disease of tobacco in Yunnan Province
YU Lei, QIN Xi-yun, DU Jing, WANG An-yun, ZHAO Ying-ying, SHANG Shan, SHEN Dun-jin, LI Hao, HUANG Qiong
Acta Phytopathologica Sinica 2009, 39 (
3
): 243-248.
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109
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A new disease of tobacco seedlings was observed at different localities in Xichou County of Wenshan Prefecture and Changning County of Baoshan City,Yunnan Province from 2006 to 2007.The symptoms were common in the float beds and transplants with small,white and dark green lesions and brown lesion on stem,sometimes wet symptom was developed.A fluorescent bacterium was isolated from diseased tissues onto KB medium.These isolates were identified as
Pseudomonas aeruginosa
based on pathogenicity,morphology,physiological and biochemical characteristics.Biolog test analysis and sequence analysis of 16S rDNA showed the similarity to
P.aeruginosa
was 99%.The disease was first reported from Philippine.This is the first report of the disease from Yunnan,China.
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Studies on the movement of Barley yellow dwarf virus-GAV in oat plant by RT-PCR
WANG Ya-nan, ZHOU Kun, WANG Xi-feng, ZHOU Guang-he
Acta Phytopathologica Sinica 2009, 39 (
3
): 249-253.
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122
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The movement of BYDV-GAV in oat plants was studied by RT-PCR.Healthy oat plants were inoculated with BYDV-GAV by vector
Schizaphis graminum
on the second leaf.The coat protein gene was amplified with total RNA from the first to sixth leaf and root of inoculated oat plants at different growth stages to test the replication and movement of the virus in the plants.The results showed that the second leaf(inoculated leaf) was identified as positive after inoculation for 5 days.After 7 days,the fourth leaves were infected,it was the new leaf at that stage.After 9 days,some of the third leaves were identified as positive.After 16 days almost all of the leaves were infected.The roots were identified as positive only at 5th,7th and 9th day respectively,and also all of the first leaves were always identified as negative,which might be due to the virus content in the plant was too low to detect.The movement of the virus in oat plant will provide basic information for selecting optimal tissue to study the movement mechanism.
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Molecular cloning and sequences analysis of 28S rDNA-D2/D3 regions of
Ditylenchus destructor
on sweet potato in China
YU Hai-ying, PENG De-liang, HU Xian-qi, HUANG Wen-kun
Acta Phytopathologica Sinica 2009, 39 (
3
): 254-261.
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199
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Two types of rDNA-ITS(Type A,900 bp and Type B,1 100 bp) were demonstrated to exist in
Ditylenchus destructor
populations on sweet potato in China.The D2/D3 regions of 28S rDNA from 22 populations of
D.destructor
were amplified with universal primer pairs D2A and D3B.All 22 populations yielded one single fragment about 780 bp.Sequence analysis and alignment were conducted by using the software MEGA4 and DNAMAN5.2 and all 22 sequences were submitted at the GenBank.The results showed that sequence differences of D2/D3 region were only in a few sites,and that the similarity was 97.2%.Two types could be distinguished in the phylogenetic tree by using UPGMA method.The evolutionary relationship between two types and the origin of
Ditylenchus
species were discussed.
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